EcoFAB 2025 Meeting

 

 

>>> REGISTRATION PENDING <<<

EcoFAB 2025

Advancing Mechanistic Microbial Science Using Fabricated Ecosystems

August 6-9, 2025 | Asilomar Conference Center, Pacific Grove, California

About the Conference

This inaugural event will bring together scientists across disciplines and ecosystems who are developing and applying fabricated laboratory ecosystems, such as SynComs, to help transition microbiome science from observational to reproducible mechanistic studies. The venue, limited conference size, and agenda is designed to promote ample opportunity for interaction and collaboration among leaders in the field.

Organizing Committee

Key Topics

  • Standardized Microbial Communities: Development of defined microbial consortia across ecosystems
  • Fabricated Ecosystem Design: Principles for creating reproducible laboratory habitats
  • Cross-Laboratory Reproducibility: Ensuring consistent results across different research settings
  • Data Standards & Protocols: Standardized workflows, computational tools, and reporting methods
  • Mechanistic Studies: Using EcoFABs to dissect ecological questions with precision
  • Computational Modeling: Predictive frameworks for modeling laboratory ecosystems and microbiome trajectories

Why Attend?

  • Connect with leaders across diverse ecosystem domains (plant, soil, human, animal, and marine)
  • Share methodologies and best practices for fabricated ecosystem development
  • Learn about cutting-edge approaches to standardization in microbiome science
  • Contribute to advancing the field from observational to mechanistic understanding
  • Collaborate on solving common challenges in reproducible microbiome research

Conference Highlights

  • Presentations from pioneers in microbiome science, modeling, and fabricated ecosystems
  • Interactive sessions on key challenges and opportunities
  • Poster sessions showcasing recent advances
  • Networking opportunities in a beautiful coastal setting

Important Dates

  • Abstract Submission Deadline: July 7, 2025
  • Registration deadline: July 7, 2025
    • Early bird special – no registration fee before May 15, 2025
    • For registration May 15 – July 7, 2025, there is a $250 fee
  • Conference Dates: August 6-9, 2025

*Accommodation information will be available via registration link (available soon)

Venue

The Asilomar Conference Center is located on the Monterey Peninsula in Pacific Grove, California. This historic facility provides a serene setting along the Pacific coastline, ideal for focused scientific discussions and networking.

Set among 107 acres of forest, dune, and beach property, Asilomar offers a unique retreat-like atmosphere that promotes intellectual exchange and collaboration.

Accommodations are available on-site, with various room options to suit different preferences and budgets.

Speakers

Agenda

Time Event Details
Wednesday, August 6, 2025 – Day 1
04:00 – 08:00 PM Arrival and Registration Asilomar Conference Center
06:00 – 07:45 PM Dinner
08:00 PM Welcome Remarks
TBD PM Jonathan Eisen 
(UC Davis)
Plenary: History and importance of model organisms in driving mechanistic biology and ecology
TBD PM Social
Thursday, August 7, 2025 – Day 2
08:00 – 09:00 AM Breakfast 08:00 – 12:00nn – Poster set-up 
Session 1: Design and construction of fabricated ecosystems
Session Chair: Trent Northen
09:00 – 09:30 AM Harris Wang
(Columbia University)
09:30 – 10:00 AM Arunima Bhattacharjee
(Pacific Northwest National Lab)
10:00 – 10:30 AM Hannah Jenkel
(CalTech)
10:30 – 11:00 AM AM Refreshments
Coffee Break
Discussions Continue
11:00 – 11:30 AM Beth Shank
(UMass Chan Medical School)
11:30 – 12:00 NN Edith Hammer
(Lund University)
12:00 – 02:00 PM Lunch and Poster Viewing
Session 2: Modeling fabricated ecosystems
Session Chair: Ophelia Venturelli
02:00 – 02:30 PM Sean Gibbons
(Institute for Systems Biology)
02:30 – 03:00 PM Lingchong You
(Duke University)
03:00 – 03:30 PM Nitin Baliga
(Institute for Systems Biology)
03:30 – 04:00 PM PM Refreshments Discussions Continue
04:00 – 05:00 PM Invited Talk 5 / Discussion (TBA)
05:00 – 06:00 PM Executive Time
06:30 – 08:00 PM Dinner
08:00 – 10:00 PM Poster Session Reception
Friday, August 8, 2025 – Day 3
08:00 – 09:00 AM Breakfast 08:00 – 12:00nn – Poster set-up 
Session 3: Advancing our understanding of host-microbe interactions
Session Chairs: John Vogel and Karsten Zengler
09:00 – 09:30 AM Mattias Hess
(UC Davis)
09:30 – 10:00 AM Vlastimil Novak
(Lawrence Berkeley National Lab)
10:00 – 10:30 AM Aziz Eida 
(University of North Carolina at Chapel Hill)
10:30 – 11:00 AM AM Refreshments
Coffee Break
11:00 – 11:30 AM Robert Quinn
(Michigan State University)
11:30 – 12:00 NN Talk 5: TBD
12:00 – 02:00 PM Lunch and Poster Viewing
Session 4: Microbiome engineering within fabricated ecosystems
Session Chair: Raquel Peixoto
02:00 – 02:30 PM Torsten Thomas
(University of New South Wales)
02:30 – 03:00 PM Rebecca Vega-Thurber
(Oregon State University)
03:00 – 03:30 PM Monica Medina
(Pennsylvania State University)
03:30 – 04:00 PM PM Refreshments Discussions Continue
04:00 – 04:30 PM Maggie Sogin
(UC Merced)
04:30 – 05:00 PM Talk 5: TBD
05:00 – 06:00 PM Executive Time
06:30 – 08:00 PM Dinner Discussions Continue
08:00 – 10:00 PM Poster Session Reception
Saturday, August 9, 2025 – Day 4
08:00 – 09:00 AM Breakfast
Session 5: Bridging the gap between laboratory and real-world applications
Session Chair: Kirsten Hofmockel
09:00 – 09:30 AM Rebecca Lybrand
(UC Davis)
09:30 – 10:00 AM Raquel Peixoto 
(KAUST)
10:00 –
10:30 AM
Erin Nuccio 
(Lawrence Berkeley National Lab)
10:30 –
11:00 AM
AM Refreshments
Coffee Break
11:00 –
12:00 NN
Closing Plenary: TBD
12:00 NN Closing Remarks

Sponsors

We gratefully acknowledge support from: